Aedes-aegypti-LVP_AGWG_CHROMOSOMES_AaegL5.fa.gz
Aedes aegypti
389.25 MB
Chromosomes
LVP_AGWG strain genomic chromosomes sequences, AaegL5 assembly, softmasked using RepeatMasker, Dust, and TRF.
Aedes-aegypti-Aag2-cell-line_CONTIGS_Aag2.fa.gz
Aedes aegypti
529.41 MB
Contigs
Aag2 cell line strain genomic contigs sequences, Aag2 assembly.
Aedes-aegypti-LVP_AGWG_SCAFFOLDS_AaegL5.fa.gz
Aedes aegypti
25.1 MB
Scaffolds
LVP_AGWG strain genomic scaffolds sequences, AaegL5 assembly, softmasked using RepeatMasker, Dust, and TRF.
Aedes-aegypti-Aag2-cell-line_SCAFFOLDS_Aag2.fa.gz
Aedes aegypti
529.44 MB
Scaffolds
Aag2 cell line strain genomic scaffolds sequences, Aag2 assembly, softmasked using RepeatMasker, Dust, and TRF.
Aedes-aegypti-LVP_AGWG_PEPTIDES_AaegL5.2.fa.gz
Aedes aegypti
5.64 MB
Peptides
LVP_AGWG strain peptide sequences, AaegL5.2 geneset.
Aedes-aegypti-LVP_AGWG_TRANSCRIPTS_AaegL5.2.fa.gz
Aedes aegypti
18.54 MB
Transcripts
LVP_AGWG strain transcript sequences, AaegL5.2 geneset.
Aedes-aegypti-LVP_AGWG_BASEFEATURES_AaegL5.2.gff3.gz
Aedes aegypti
5.12 MB
Basefeatures
LVP_AGWG strain AaegL5.2 geneset in GFF3 format.
Aedes-aegypti-LVP_AGWG_BASEFEATURES_AaegL5.2.gtf.gz
Aedes aegypti
4.09 MB
Basefeatures
LVP_AGWG strain AaegL5.2 geneset in GTF (v2.2) format.
Aedes-aegypti_EST-CLIPPED_2012-12.fa.gz
Aedes aegypti
64.7 MB
ESTs
Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.
Aedes-aegypti_EST-RAW_2012-12.fa.gz
Aedes aegypti
64.87 MB
Raw
Publicly submitted EST/cDNAs as of December 2012.
Aedes-aegypti-Liverpool_BAC-ENDS_2012-12.fa.gz
Aedes aegypti
28.21 MB
BAC ends
Liverpool strain BAC end sequences from the NCBI trace archive as of December 2012.
Aedes-aegypti-Aag2-cell-line_CONTIG2SCAFFOLD_Aag2.agp.gz
Aedes aegypti
28.36 KB
Contig to Scaffold mapping
AGP (v2.0) file relating contigs to scaffolds for the Aedes aegypti Aag2 cell line strain, Aag2 assembly.
Aedes-aegypti-LVP_AGWG_SCAFFOLD2CHROMOSOME_AaegL5.agp.gz
Aedes aegypti
18.17 KB
Scaffold to Chromosome mapping
AGP (v2.0) file relating scaffolds to chromosomes for the Aedes aegypti LVP_AGWG strain, AaegL5 assembly.
Aedes-aegypti-Liverpool_MAPPINGS_AaegL3.5-AaegL5.1.txt
Aedes aegypti
1.11 MB
ID Mapping
Stable ID mapping between genesets AaegL3.5 and AaegL5.1
Aedes-aegypti-Liverpool_MAPPINGS_AaegL3.3-AaegL3.4.txt
Aedes aegypti
104.44 KB
ID Mapping
Stable ID mapping between genesets AaegL3.3 and AaegL3.4 (RNA gene update)
Aedes-aegypti-Liverpool_MODIFICATIONS_AaegL2.2-AaegL3.1-ncRNA.txt
Aedes aegypti
61.66 KB
ID Mapping
Liverpool strain gene prediction stable identifier mapping for ncRNA from the AaegL2.2 to AaegL3.1 geneset
Aedes-aegypti-Aag2-cell-line_REPEATS.lib
Aedes aegypti
1.7 MB
RepeatMasker library
RepeatMasker library file of repeats for Aedes aegypti, Aag2 cell line strain.
Aedes-aegypti-Liverpool_REPEATS.lib
Aedes aegypti
5.27 MB
RepeatMasker library
RepeatMasker library file of repeats for Aedes aegypti, Liverpool strain.
Aedes-aegypti-LVP_AGWG_REPEATFEATURES_AaegL5.gff3.gz
Aedes aegypti
107.2 MB
Repeat features
LVP_AGWG strain AaegL5 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.
Aedes-aegypti-Aag2-cell-line_REPEATFEATURES_Aag2.gff3.gz
Aedes aegypti
83.78 MB
Repeat features
Aag2 cell line strain Aag2 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.
Aedes-aegypti_EXPR-STATS_VB-2019-06.txt.gz
Aedes aegypti
33.19 MB
Expression statistics
Tab-delimited, log2 transformed expression values, gene x condition: mean, variance and number of replicates. The means are no longer median-subtracted.
Aedes-albopictus-C6-36-cell-line_CONTIGS_GCA_001876365.2.fa.gz
Aedes albopictus
675.21 MB
Contigs
C6/36 cell line strain genomic contigs sequences, GCA_001876365.2 assembly.
Aedes-albopictus-Foshan_CONTIGS_AaloF1.fa.gz
Aedes albopictus
516.78 MB
Contigs
Foshan strain genomic contigs sequences, AaloF1 assembly.
Aedes-albopictus-C6-36-cell-line_SCAFFOLDS_GCA_001876365.2.fa.gz
Aedes albopictus
675.21 MB
Scaffolds
C6/36 cell line strain genomic scaffolds sequences, GCA_001876365.2 assembly, softmasked using RepeatMasker, Dust, and TRF.
Aedes-albopictus-Foshan_SCAFFOLDS_AaloF1.fa.gz
Aedes albopictus
518.01 MB
Scaffolds
Foshan strain genomic scaffolds sequences, AaloF1 assembly (not repeat-masked).