Software Downloads
VectorBase source code:
- VectorBase site - Code for the VectorBase Drupal web site.
Source code for other tools:
- Apollo - Codebase for the Apollo collaborative genome annotation editor.
- BioMart - Download page for BioMart, used for data mining queries.
- Bio Parser - Parser used by VBPopBio to load ISA-Tab files prior to loading into the database.
- Expression Map - Web code and maintenance scripts for VectorBase's expression map.
- Galaxy - Instructions for getting Galaxy, a web-based data-focused biomedical research platform.
- Genome Browser - Portal to access source code and data for the Ensembl Genome Browser.
- PopBio - VectorBase's Population Biology resource web code, database model, loading scripts and REST server. Back end services use Perl and lean heavily on Bio::Chado::Schema, DBIx::Class and Dancer.
- PopBio Map - PopBio map web code.
- Vocabulary/Ontology - VectorBase's internal controlled vocabulary/ontology.